About Samtools
Samtools is a company based in United Kingdom founded in 2014. Samtools offers products and services including Samtools, BCFtools, and HTSlib. Samtools operates in a competitive market with competitors including Pydantic, PandasAI, Polars, Scramjet and SQLite, among others.
- Headquarter United Kingdom
- SectorsHealthcare
- Website htslib.org
- Social X
- Legal Name Genome Research Limited
Products & Services of Samtools
Samtools offers a comprehensive portfolio of products and services, including Samtools, BCFtools, and HTSlib.
Programs for reading, writing, and editing sequencing file formats
Tools for handling BCF2, VCF, and genetic variant files
C library for high-throughput data reading and writing
Competitors of Samtools
Samtools operates in a dynamic and competitive business environment, facing competition from various established players and emerging companies in the market. The competitive landscape includes prominent companies such as Pydantic, PandasAI, Polars, Scramjet and SQLite, among others.
| Company Name | Domain | Founded | HQ Location | Total funding | Employees | Description |
|---|---|---|---|---|---|---|
| pydantic.dev | 2022 | London, United Kingdom | $17.2M | – | Data processing frameworks for Python validation are provided. | |
| pandas-ai.com | 2023 | Berlin, Germany | $1.23M | – | Generative AI is integrated into pandas for enterprise text analytics. | |
| pola.rs | 2021 | Amsterdam, Netherlands | $25M | – | Rust-based data frame library for processing and analysis. | |
| scramjet.org | 2018 | Suwalki, Poland | – | – | Cloud-based frameworks for data streaming and processing are provided. | |
| sqlite.org | 2000 | Charlotte, United States | – | 5 | A self-contained SQL database engine is implemented in C. | |
| furnace.org | 2004 | London, United Kingdom | – | – | An open-source framework for efficient data processing. | |
| matlogica.com | 2018 | London, United Kingdom | – | 2 | Develops software libraries for efficient data processing. | |
| open3d.org | 2018 | United States | – | – | Open-source library for 3D data processing, algorithms, and visualization tools. |
Detailed competitors of Samtools
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- Full competitor set
- Operating metrics
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Web traffic of Samtools
Websites that share an audience with Samtools (htslib.org).
Websites whose visitors overlap most with Samtools. Affinity shows how closely the audiences match.
| Website | Domain | Audience affinity | Monthly visits | Global rank | Profile |
|---|---|---|---|---|---|
| amelieff.jp | 90% | 9.7K | #2,218,248 | View details | |
| sanger.ac.uk | 63% | 257.8K | #169,901 | View details | |
| cls.fr | 51% | 28.1K | #842,946 | View details |
Similar companies to Samtools
10 companies that operate in the same segment as Samtools (Clinical Genomics), ranked by their profile score on The Company Check.
| Company | Description | Founded | Location | Total funding | Revenue | Employees |
|---|---|---|---|---|---|---|
Digital sequencing technology for cancer detection is developed. | 2012 | Redwood City, California, United States | USD 557.5 M | USD 982.02 M | 2,020 | |
Circulating tumor DNA is screened for early cancer detection. | 2016 | Menlo Park, California, United States | USD 3.22 B | USD 147.17 M | 1,000 | |
Provider of DNA testing services to create a family tree and ancestor | 2003 | Yehud, Central District, Israel | USD 40 M | – | – | |
CAR T-cell and T-cell receptor immunotherapies for cancer are developed. | 2013 | Seattle, Washington, United States | USD 316.67 M | – | 520 | |
Panomic profiling technologies are developed for cancer precision medicine. | 1996 | Irving, Texas, United States | USD 1.23 B | – | 1,339 | |
Genomics-based diagnostic tests for cancer are provided. | 2010 | Cambridge, Massachusetts, United States | USD 96.5 M | – | – | |
Digital molecular biology analytics are developed for disease management. | 2012 | Carlsbad, California, United States | USD 95.02 M | – | 46 | |
Diagnostic tests for cancer prognosis are provided. | 2008 | Friendswood, Texas, United States | USD 61.97 M | USD 344.23 M | 761 | |
Genomic database for clinical research is provided. | 2015 | San Francisco, California, United States | USD 435 M | – | – | |
Genomic sequencing and diagnosis software is provided for healthcare. | 2011 | Menlo Park, California, United States | USD 87.3 M | USD 69.65 M | 229 |
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Frequently Asked Questions about Samtools
Samtools was founded in 2014.
Samtools is headquartered in United Kingdom.
Samtools is a collection of open-source programs designed for handling high-throughput sequencing data, including reading, writing, editing, and indexing SAM, BAM, and CRAM formats. It includes tools like BCFtools for variant calling and HTSlib as a supporting library. Based in England, it supports bioinformatics workflows such as mapping and filtering genetic data, aiding researchers in genomics analysis without commercial transactions.
Samtools offers Samtools, BCFtools, and HTSlib.
Samtools operates through Genome Research Limited.